Yes sir, those are your drains. I pictured mine below. Are your clogged with crap or have they purposefully been closed with something? You pic threw me for a second because of its orientation.
2014 JKU Sahara.
Open the door and look between the weatherstripping and the outer skin of the door panel. My front doors have 3 each 5/8" x 3/8" holes. 1 on the hinge side, 1 in the middle and one on the latch side. The photo shows the driver's side bottom left, or latch side, of the door. The black on top is the weatherstrip, the seam below the hole is the rolled and welded seam of the exterior door panel to the tub of the door. The back doors, because the bottom edge of the door is pretty short, only have 2 holes each.
Think of it this way- the entire door is a tub, a bowl. The exterior panel of the door is a flat lid or cover to the tub. The holes are located almost right where the rolled and welded seam brings the exterior door panel and the door tub together.
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